Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr domain-containing protein | CALAB_RS18445 | Not Available | Positive | 4683464 - 4685647 | 81717.9 |
| had family hydrolase | CALAB_RS18450 | Not Available | Positive | 4685792 - 4686517 | 27268.8 |
| hypothetical protein | CALAB_RS18455 | Not Available | Negative | 4686643 - 4689684 | 115754.0 |
| upf0158 family protein | CALAB_RS18460 | Not Available | Positive | 4689860 - 4690339 | 18435.3 |
| hypothetical protein | CALAB_RS18470 | Not Available | Negative | 4690744 - 4691415 | 25993.6 |
| multiheme c-type cytochrome | CALAB_RS18475 | Not Available | Negative | 4691481 - 4692986 | 56202.0 |
| hypothetical protein | CALAB_RS18480 | Not Available | Negative | 4693007 - 4694020 | 38308.6 |
| methyltransferase family protein | CALAB_RS18485 | Not Available | Negative | 4694543 - 4694926 | 15577.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | CALAB_RS18490 | Not Available | Positive | 4695274 - 4696275 | 36528.2 |
| rna polymerase factor sigma-54 | CALAB_RS18495 | Not Available | Positive | 4696724 - 4698202 | 58325.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
