Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (d)cmp kinase | CALAB_RS18395 | Not Available | Negative | 4671768 - 4672457 | 25675.1 |
| hypothetical protein | CALAB_RS18400 | Not Available | Negative | 4672460 - 4674163 | 64484.3 |
| pseudouridine synthase | CALAB_RS18405 | Not Available | Negative | 4674147 - 4674875 | 27773.3 |
| smc-scp complex subunit scpb | CALAB_RS18410 | Not Available | Negative | 4674882 - 4675568 | 25845.0 |
| segregation and condensation protein a | CALAB_RS18415 | Not Available | Negative | 4675570 - 4676298 | 29108.9 |
| tryptophan--trna ligase | CALAB_RS18420 | Not Available | Negative | 4676295 - 4677272 | 37162.8 |
| t9ss type a sorting domain-containing protein | CALAB_RS18425 | Not Available | Negative | 4677487 - 4680363 | 107051.0 |
| hnh endonuclease | CALAB_RS18430 | Not Available | Negative | 4680483 - 4680986 | 19194.0 |
| nlpc/p60 family protein | CALAB_RS18435 | Not Available | Negative | 4681005 - 4681781 | 29568.1 |
| transcription termination factor rho | CALAB_RS18440 | Not Available | Negative | 4681946 - 4683028 | 40058.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
