Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | CALAB_RS18245 | Not Available | Negative | 4633332 - 4633940 | 22582.4 |
| protein-disulfide reductase dsbd family protein | CALAB_RS18250 | Not Available | Negative | 4633995 - 4636154 | 80047.6 |
| mate family efflux transporter | CALAB_RS18255 | Not Available | Positive | 4636357 - 4637685 | 49740.0 |
| phosphatase pap2 family protein | CALAB_RS20455 | Not Available | Positive | 4637693 - 4638505 | 29965.2 |
| is110 family transposase | CALAB_RS18265 | Not Available | Positive | 4639238 - 4640029 | 30542.4 |
| is1634 family transposase | CALAB_RS20460 | Not Available | Positive | 4640090 - 4641886 | 70194.1 |
| is110 family transposase | CALAB_RS18275 | Not Available | Positive | 4641916 - 4642395 | 17984.1 |
| is1182 family transposase | CALAB_RS18280 | Not Available | Positive | 4642897 - 4644657 | 68810.8 |
| sigma-54-dependent transcriptional regulator | CALAB_RS18285 | Not Available | Negative | 4645262 - 4646446 | 45057.2 |
| sensor histidine kinase | CALAB_RS18290 | Not Available | Negative | 4646422 - 4647678 | 47833.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
