Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(55) synthase trub | CALAB_RS18195 | Not Available | Negative | 4622867 - 4623604 | 27465.5 |
| 30s ribosome-binding factor rbfa | CALAB_RS18200 | Not Available | Negative | 4623579 - 4623944 | 14280.2 |
| duf503 domain-containing protein | CALAB_RS18205 | Not Available | Negative | 4623946 - 4624227 | 10670.0 |
| translation initiation factor if-2 | CALAB_RS18210 | Not Available | Negative | 4624229 - 4627015 | 103280.0 |
| transcription termination factor nusa | CALAB_RS18215 | Not Available | Negative | 4627064 - 4628353 | 48595.2 |
| ribosome maturation factor rimp | CALAB_RS18220 | Not Available | Negative | 4628372 - 4628821 | 17328.0 |
| hypothetical protein | CALAB_RS18225 | Not Available | Negative | 4629114 - 4630058 | 37276.7 |
| l-threonylcarbamoyladenylate synthase | CALAB_RS18230 | Not Available | Negative | 4630073 - 4631248 | 43985.2 |
| lysophospholipid acyltransferase family protein | CALAB_RS18235 | Not Available | Negative | 4631281 - 4632183 | 35027.9 |
| hypothetical protein | CALAB_RS18240 | Not Available | Positive | 4632297 - 4633193 | 33778.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
