Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | CALAB_RS18140 | Not Available | Positive | 4610575 - 4611975 | 53431.8 |
| deoxyribonuclease iv | CALAB_RS18145 | Not Available | Negative | 4612215 - 4613066 | 32208.5 |
| response regulator | CALAB_RS20450 | Not Available | Positive | 4613537 - 4615960 | 91691.0 |
| c-type cytochrome | CALAB_RS18160 | Not Available | Negative | 4616029 - 4616358 | 12652.3 |
| polysaccharide deacetylase family protein | CALAB_RS18165 | Not Available | Negative | 4616376 - 4617173 | 30570.0 |
| alanine dehydrogenase | CALAB_RS18170 | Not Available | Negative | 4617181 - 4618305 | 41243.7 |
| m16 family metallopeptidase | CALAB_RS18175 | Not Available | Negative | 4618298 - 4619530 | 46927.1 |
| polyribonucleotide nucleotidyltransferase | CALAB_RS18180 | Not Available | Negative | 4619539 - 4621662 | 78276.8 |
| 30s ribosomal protein s15 | CALAB_RS18185 | Not Available | Negative | 4621687 - 4621956 | 10480.9 |
| bifunctional riboflavin kinase/fad synthetase | CALAB_RS18190 | Not Available | Negative | 4621969 - 4622889 | 35106.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
