Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | CALAB_RS18040 | Not Available | Negative | 4579343 - 4580233 | 34101.4 |
| ycf48-related protein | CALAB_RS18045 | Not Available | Negative | 4580414 - 4583035 | 95556.2 |
| duf6850 family outer membrane beta-barrel protein | CALAB_RS18050 | Not Available | Negative | 4583083 - 4584543 | 57153.4 |
| duf4876 domain-containing protein | CALAB_RS18055 | Not Available | Negative | 4584545 - 4585684 | 42586.3 |
| tonb-dependent receptor | CALAB_RS18060 | Not Available | Negative | 4585708 - 4588494 | 105916.0 |
| vps10 domain-containing protein | CALAB_RS18065 | Not Available | Negative | 4588761 - 4592111 | 124869.0 |
| php domain-containing protein | CALAB_RS18070 | Not Available | Negative | 4592393 - 4593256 | 31920.7 |
| hypothetical protein | CALAB_RS18075 | Not Available | Negative | 4593256 - 4593453 | 7757.35 |
| nucleotide sugar dehydrogenase | CALAB_RS18080 | Not Available | Negative | 4593507 - 4594820 | 49250.5 |
| udp-glucose dehydrogenase family protein | CALAB_RS18085 | Not Available | Negative | 4594885 - 4596222 | 49924.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
