Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar-binding protein | CALAB_RS21460 | Not Available | Negative | 4563060 - 4565585 | 93599.9 |
| cellulase family glycosylhydrolase | CALAB_RS17995 | Not Available | Negative | 4565825 - 4567828 | 75648.4 |
| hypothetical protein | CALAB_RS18000 | Not Available | Positive | 4568591 - 4569820 | 46551.1 |
| hypothetical protein | CALAB_RS18005 | Not Available | Negative | 4570162 - 4571085 | 37041.4 |
| slc13 family permease | CALAB_RS18010 | Not Available | Negative | 4571297 - 4573075 | 65501.8 |
| upxy family transcription antiterminator | CALAB_RS18015 | Not Available | Negative | 4573219 - 4573740 | 20435.1 |
| alkaline phosphatase family protein | CALAB_RS18020 | Not Available | Negative | 4573849 - 4575171 | 50730.5 |
| 4fe-4s binding protein | CALAB_RS18025 | Not Available | Negative | 4575443 - 4577407 | 74507.1 |
| duf4857 domain-containing protein | CALAB_RS18030 | Not Available | Negative | 4577431 - 4578666 | 48497.0 |
| hypothetical protein | CALAB_RS18035 | Not Available | Negative | 4578663 - 4579334 | 26151.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
