Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS17930 | Not Available | Negative | 4549590 - 4550504 | 35419.9 |
| brna antitoxin family protein | CALAB_RS17935 | Not Available | Negative | 4550776 - 4551057 | 11093.6 |
| brnt family toxin | CALAB_RS17940 | Not Available | Negative | 4551054 - 4551365 | 12423.9 |
| hypothetical protein | CALAB_RS17945 | Not Available | Negative | 4551408 - 4551731 | 12236.3 |
| hypothetical protein | CALAB_RS17950 | Not Available | Positive | 4551999 - 4553276 | 48792.6 |
| l-aspartate oxidase | CALAB_RS17955 | Not Available | Negative | 4553403 - 4554971 | 57830.4 |
| quinolinate synthase nada | CALAB_RS17960 | Not Available | Negative | 4555051 - 4556094 | 39250.5 |
| carboxylating nicotinate-nucleotide diphosphorylase | CALAB_RS17965 | Not Available | Negative | 4556115 - 4556936 | 29908.4 |
| n(4)-(beta-n-acetylglucosaminyl)-l-asparaginase | CALAB_RS17975 | Not Available | Negative | 4557809 - 4558870 | 38645.3 |
| prolyl oligopeptidase family serine peptidase | CALAB_RS17985 | Not Available | Negative | 4560182 - 4562656 | 93329.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
