Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00725 family protein | CALAB_RS17880 | Not Available | Negative | 4536307 - 4536762 | 15820.5 |
| asparagine--trna ligase | CALAB_RS17885 | Not Available | Negative | 4536762 - 4538057 | 49933.7 |
| class 1 fructose-bisphosphatase | CALAB_RS17890 | Not Available | Negative | 4538157 - 4539173 | 37647.1 |
| sigma-54-dependent transcriptional regulator | CALAB_RS17895 | Not Available | Negative | 4539431 - 4540888 | 55396.2 |
| atp-binding protein | CALAB_RS17900 | Not Available | Negative | 4540878 - 4542413 | 59797.9 |
| extracellular solute-binding protein | CALAB_RS17905 | Not Available | Negative | 4542419 - 4543738 | 51679.1 |
| peptide-methionine (s)-s-oxide reductase msra | CALAB_RS17910 | Not Available | Positive | 4544011 - 4544631 | 23584.2 |
| na+/h+ antiporter nhac family protein | CALAB_RS17915 | Not Available | Positive | 4545340 - 4546824 | 54002.7 |
| glycoside hydrolase family 130 protein | CALAB_RS17920 | Not Available | Negative | 4547051 - 4548019 | 36087.2 |
| glycosyltransferase | CALAB_RS17925 | Not Available | Negative | 4548040 - 4549179 | 43676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
