Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiolase domain-containing protein | CALAB_RS17720 | Not Available | Negative | 4505786 - 4506946 | 41338.0 |
| hydroxymethylglutaryl-coa synthase | CALAB_RS17725 | Not Available | Negative | 4507098 - 4508162 | 38164.5 |
| eve domain-containing protein | CALAB_RS17730 | Not Available | Negative | 4508611 - 4509084 | 18445.0 |
| sdr family nad(p)-dependent oxidoreductase | CALAB_RS17735 | Not Available | Negative | 4509094 - 4509861 | 28558.6 |
| duf3160 domain-containing protein | CALAB_RS17740 | Not Available | Positive | 4510194 - 4512740 | 97535.3 |
| hypothetical protein | CALAB_RS17745 | Not Available | Negative | 4512791 - 4513288 | 18968.4 |
| fmdb family zinc ribbon protein | CALAB_RS17750 | Not Available | Positive | 4513338 - 4513832 | 19095.5 |
| di-trans,poly-cis-decaprenylcistransferase | CALAB_RS17760 | Not Available | Negative | 4514116 - 4514871 | 28789.4 |
| winged helix-turn-helix domain-containing protein | CALAB_RS17765 | Not Available | Positive | 4515023 - 4517758 | 103392.0 |
| peptidylprolyl isomerase | CALAB_RS17775 | Not Available | Negative | 4518654 - 4520081 | 55642.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
