Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1380 family transposase | CALAB_RS17660 | Not Available | Negative | 4494786 - 4496096 | 51540.4 |
| hypothetical protein | CALAB_RS17670 | Not Available | Positive | 4496549 - 4496800 | 9551.62 |
| imidazole glycerol phosphate synthase subunit hish | CALAB_RS17675 | Not Available | Negative | 4497035 - 4497619 | 21622.2 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | CALAB_RS17680 | Not Available | Negative | 4497619 - 4498710 | 41368.8 |
| histidinol-phosphate transaminase | CALAB_RS17685 | Not Available | Negative | 4498859 - 4499929 | 40591.2 |
| histidinol dehydrogenase | CALAB_RS17690 | Not Available | Negative | 4499919 - 4501247 | 48276.8 |
| atp phosphoribosyltransferase | CALAB_RS17695 | Not Available | Negative | 4501260 - 4502114 | 31308.6 |
| threonine aldolase family protein | CALAB_RS17700 | Not Available | Negative | 4502367 - 4503410 | 39217.5 |
| gaf domain-containing protein | CALAB_RS17705 | Not Available | Negative | 4503775 - 4504266 | 18273.3 |
| zn-ribbon domain-containing ob-fold protein | CALAB_RS17715 | Not Available | Negative | 4505232 - 4505636 | 15422.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
