Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiester glycosidase family protein | CALAB_RS17500 | Not Available | Positive | 4451967 - 4452767 | 30821.4 |
| hypothetical protein | CALAB_RS17505 | Not Available | Positive | 4452989 - 4453582 | 23048.3 |
| efflux rnd transporter permease subunit | CALAB_RS17510 | Not Available | Negative | 4453952 - 4457041 | 114366.0 |
| efflux rnd transporter periplasmic adaptor subunit | CALAB_RS17515 | Not Available | Negative | 4457085 - 4458191 | 41151.9 |
| tolc family protein | CALAB_RS17520 | Not Available | Negative | 4458208 - 4459554 | 51032.1 |
| tetr/acrr family transcriptional regulator | CALAB_RS17525 | Not Available | Negative | 4459557 - 4460177 | 24357.5 |
| radical sam protein | CALAB_RS17530 | Not Available | Positive | 4460432 - 4461418 | 37310.6 |
| uroporphyrinogen decarboxylase family protein | CALAB_RS17535 | Not Available | Negative | 4461556 - 4462566 | 38707.6 |
| endonuclease/exonuclease/phosphatase family protein | CALAB_RS17540 | Not Available | Negative | 4462598 - 4463452 | 32565.4 |
| creatininase family protein | CALAB_RS17545 | Not Available | Negative | 4463454 - 4464248 | 30240.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
