Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybbr-like domain-containing protein | CALAB_RS17455 | Not Available | Negative | 4439697 - 4440650 | 36345.6 |
| s-adenosyl-l-methionine hydroxide adenosyltransferase family protein | CALAB_RS17460 | Not Available | Negative | 4440677 - 4441465 | 29261.3 |
| dna-formamidopyrimidine glycosylase | CALAB_RS17465 | Not Available | Negative | 4441462 - 4442280 | 31088.0 |
| polysaccharide deacetylase family protein | CALAB_RS17470 | Not Available | Negative | 4442398 - 4443693 | 49642.1 |
| dtdp-glucose 4,6-dehydratase | CALAB_RS17475 | Not Available | Negative | 4443863 - 4444876 | 38733.7 |
| hypothetical protein | CALAB_RS17480 | Not Available | Positive | 4445100 - 4445570 | 17867.4 |
| hypothetical protein | CALAB_RS21415 | Not Available | Negative | 4445833 - 4446006 | 6602.16 |
| pyridoxal phosphate-dependent decarboxylase family protein | CALAB_RS17485 | Not Available | Negative | 4447021 - 4448445 | 54319.6 |
| transglutaminase-like domain-containing protein | CALAB_RS17490 | Not Available | Negative | 4448666 - 4449832 | 44031.7 |
| beta-n-acetylhexosaminidase | CALAB_RS17495 | Not Available | Negative | 4449872 - 4451557 | 64312.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
