Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | CALAB_RS20425 | Not Available | Negative | 4421681 - 4423402 | 65656.7 |
| mfs transporter | CALAB_RS17410 | Not Available | Positive | 4424514 - 4425767 | 45823.0 |
| cache domain-containing protein | CALAB_RS17415 | Not Available | Negative | 4425821 - 4427857 | 77786.2 |
| cytochrome c family protein | CALAB_RS17420 | Not Available | Negative | 4427929 - 4428474 | 20022.4 |
| la_2272 family surface repeat-containing protein | CALAB_RS17425 | Not Available | Negative | 4429435 - 4430544 | 36845.1 |
| type ii toxin-antitoxin system hica family toxin | CALAB_RS22025 | Not Available | Negative | 4430930 - 4431154 | 8454.52 |
| type ii toxin-antitoxin system hicb family antitoxin | CALAB_RS17435 | Not Available | Negative | 4431151 - 4431363 | 7705.26 |
| hypothetical protein | CALAB_RS17440 | Not Available | Negative | 4431970 - 4436205 | 161331.0 |
| vwa domain-containing protein | CALAB_RS17445 | Not Available | Negative | 4436480 - 4438600 | 80386.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | CALAB_RS17450 | Not Available | Negative | 4438681 - 4439700 | 36712.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
