Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside recognition domain-containing protein | CALAB_RS17255 | Not Available | Negative | 4387809 - 4388486 | 24355.4 |
| agmx/pgli c-terminal domain-containing protein | CALAB_RS17265 | Not Available | Positive | 4389665 - 4390639 | 37379.1 |
| dephospho-coa kinase | CALAB_RS17270 | Not Available | Negative | 4390632 - 4391288 | 25418.9 |
| s8 family serine peptidase | CALAB_RS20415 | Not Available | Negative | 4391291 - 4395319 | 150397.0 |
| tetratricopeptide repeat protein | CALAB_RS17280 | Not Available | Negative | 4395319 - 4396842 | 58568.1 |
| lps assembly lipoprotein lpte | CALAB_RS17285 | Not Available | Negative | 4396836 - 4397402 | 20773.2 |
| sigma-54 interaction domain-containing protein | CALAB_RS17290 | Not Available | Negative | 4397497 - 4398657 | 44032.3 |
| metallophosphoesterase family protein | CALAB_RS17295 | Not Available | Negative | 4398967 - 4399803 | 33331.1 |
| hydrogenase maturation protease | CALAB_RS17300 | Not Available | Negative | 4400013 - 4400495 | 17131.0 |
| ni/fe-hydrogenase, b-type cytochrome subunit | CALAB_RS17305 | Not Available | Negative | 4400473 - 4401156 | 27160.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
