Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | CALAB_RS17210 | Not Available | Negative | 4377906 - 4378547 | 23928.1 |
| transposase | CALAB_RS21795 | Not Available | Positive | 4378878 - 4379579 | 27503.5 |
| transposase | CALAB_RS21800 | Not Available | Positive | 4379699 - 4380637 | 36436.7 |
| b12-binding domain-containing radical sam protein | CALAB_RS17220 | Not Available | Negative | 4380697 - 4382322 | 62312.1 |
| abc transporter atp-binding protein | CALAB_RS17225 | Not Available | Positive | 4382501 - 4384396 | 72168.7 |
| duf3108 domain-containing protein | CALAB_RS17230 | Not Available | Positive | 4384407 - 4385264 | 32917.2 |
| superoxide dismutase | CALAB_RS17235 | Not Available | Positive | 4385433 - 4386056 | 23622.9 |
| pepsy-associated tm helix domain-containing protein | CALAB_RS17240 | Not Available | Negative | 4386089 - 4386646 | 21566.5 |
| duf4920 domain-containing protein | CALAB_RS17245 | Not Available | Negative | 4386738 - 4387211 | 17523.8 |
| spore maturation protein | CALAB_RS17250 | Not Available | Negative | 4387283 - 4387816 | 19259.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
