Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flgd immunoglobulin-like domain containing protein | CALAB_RS17155 | Not Available | Negative | 4362946 - 4363509 | 21181.2 |
| is1634 family transposase | CALAB_RS17160 | Not Available | Positive | 4363825 - 4365486 | 64766.1 |
| duf1573 domain-containing protein | CALAB_RS17165 | Not Available | Negative | 4365544 - 4367565 | 77918.0 |
| sdr family oxidoreductase | CALAB_RS17170 | Not Available | Positive | 4368176 - 4368931 | 27352.8 |
| right-handed parallel beta-helix repeat-containing protein | CALAB_RS20410 | Not Available | Positive | 4369192 - 4372800 | 131891.0 |
| class ii fructose-bisphosphate aldolase | CALAB_RS17185 | Not Available | Negative | 4373493 - 4374569 | 39519.1 |
| putative manganese transporter | CALAB_RS17190 | Not Available | Negative | 4375077 - 4376102 | 37923.9 |
| class i sam-dependent methyltransferase | CALAB_RS17195 | Not Available | Negative | 4376129 - 4376779 | 25306.7 |
| nifb/nifx family molybdenum-iron cluster-binding protein | CALAB_RS17200 | Not Available | Negative | 4376781 - 4377173 | 14653.9 |
| threonyl-trna synthetase editing domain-containing protein | CALAB_RS17205 | Not Available | Negative | 4377375 - 4377785 | 15663.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
