Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl-peptidase 3 family protein | CALAB_RS17105 | Not Available | Negative | 4347420 - 4349096 | 64329.5 |
| nad(p)/fad-dependent oxidoreductase | CALAB_RS17110 | Not Available | Negative | 4349131 - 4350360 | 45371.9 |
| m64 family metallopeptidase | CALAB_RS17115 | Not Available | Negative | 4350385 - 4351842 | 56230.5 |
| hypothetical protein | CALAB_RS17120 | Not Available | Negative | 4352058 - 4352237 | 6772.24 |
| alkaline phosphatase | CALAB_RS17125 | Not Available | Negative | 4352250 - 4353611 | 49459.4 |
| s1 family peptidase | CALAB_RS17130 | Not Available | Positive | 4353757 - 4354818 | 40032.4 |
| duf2459 domain-containing protein | CALAB_RS17135 | Not Available | Negative | 4354799 - 4355512 | 27978.1 |
| coth kinase family protein | CALAB_RS20405 | Not Available | Negative | 4356015 - 4358537 | 97735.0 |
| sodium:solute symporter family protein | CALAB_RS17145 | Not Available | Negative | 4358676 - 4360583 | 70965.8 |
| glutamate formimidoyltransferase | CALAB_RS17150 | Not Available | Negative | 4360909 - 4362741 | 67598.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
