Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | CALAB_RS01450 | Not Available | Positive | 382591 - 383607 | 38395.7 |
| thiol reductant abc exporter subunit cydd | CALAB_RS01455 | Not Available | Positive | 383710 - 385440 | 64966.3 |
| thiol reductant abc exporter subunit cydc | CALAB_RS01460 | Not Available | Positive | 385440 - 387182 | 65676.9 |
| sensor histidine kinase | CALAB_RS01465 | Not Available | Negative | 387148 - 388680 | 57455.2 |
| response regulator transcription factor | CALAB_RS01470 | Not Available | Negative | 388677 - 389393 | 27333.2 |
| polysaccharide biosynthesis/export family protein | CALAB_RS01475 | Not Available | Negative | 389522 - 390019 | 18649.7 |
| gumc family protein | CALAB_RS01480 | Not Available | Negative | 390040 - 392406 | 89148.6 |
| aminotransferase class v-fold plp-dependent enzyme | CALAB_RS01485 | Not Available | Negative | 392571 - 393695 | 42733.5 |
| cupin domain-containing protein | CALAB_RS01490 | Not Available | Positive | 393844 - 394197 | 13407.5 |
| giy-yig nuclease family protein | CALAB_RS01495 | Not Available | Negative | 394387 - 394629 | 9739.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
