Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| satd family protein | CALAB_RS20395 | Not Available | Positive | 4338033 - 4338680 | 24521.6 |
| hypothetical protein | CALAB_RS20400 | Not Available | Positive | 4338916 - 4339377 | 17670.0 |
| m16 family metallopeptidase | CALAB_RS17065 | Not Available | Negative | 4339458 - 4342208 | 102856.0 |
| sdr family oxidoreductase | CALAB_RS17070 | Not Available | Negative | 4342278 - 4342979 | 25439.9 |
| potassium channel beta subunit family protein | CALAB_RS17075 | Not Available | Negative | 4342979 - 4343977 | 37751.4 |
| ribose 5-phosphate isomerase b | CALAB_RS17080 | Not Available | Negative | 4344002 - 4344631 | 22975.8 |
| m48 family metallopeptidase | CALAB_RS17085 | Not Available | Negative | 4344663 - 4345385 | 27686.6 |
| response regulator | CALAB_RS17090 | Not Available | Positive | 4345528 - 4346196 | 25607.5 |
| heavy-metal-associated domain-containing protein | CALAB_RS17095 | Not Available | Negative | 4346198 - 4346398 | 7170.46 |
| biotin/lipoate a/b protein ligase family protein | CALAB_RS17100 | Not Available | Negative | 4346416 - 4347417 | 39148.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
