Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS16945 | Not Available | Negative | 4314667 - 4315125 | 17445.6 |
| p-ii family nitrogen regulator | CALAB_RS16950 | Not Available | Negative | 4315210 - 4315551 | 12537.3 |
| efflux rnd transporter permease subunit | CALAB_RS16955 | Not Available | Negative | 4315614 - 4318775 | 117497.0 |
| efflux rnd transporter periplasmic adaptor subunit | CALAB_RS16960 | Not Available | Negative | 4318890 - 4320446 | 58332.2 |
| tolc family protein | CALAB_RS16965 | Not Available | Negative | 4320459 - 4321706 | 47502.4 |
| hypothetical protein | CALAB_RS16970 | Not Available | Negative | 4321703 - 4321984 | 10770.4 |
| hypothetical protein | CALAB_RS16975 | Not Available | Negative | 4322219 - 4322824 | 22052.4 |
| duf6804 family protein | CALAB_RS16980 | Not Available | Negative | 4322923 - 4323243 | 12483.9 |
| hypothetical protein | CALAB_RS16985 | Not Available | Negative | 4323310 - 4325193 | 72974.3 |
| arnt family glycosyltransferase | CALAB_RS16990 | Not Available | Positive | 4325720 - 4327225 | 58568.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
