Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf438 domain-containing protein | CALAB_RS16905 | Not Available | Negative | 4302973 - 4304211 | 48359.9 |
| rrf2 family transcriptional regulator | CALAB_RS16910 | Not Available | Negative | 4304262 - 4304675 | 15833.3 |
| tetratricopeptide repeat protein | CALAB_RS16915 | Not Available | Negative | 4305170 - 4306000 | 31801.3 |
| zinc-ribbon domain-containing protein | CALAB_RS22020 | Not Available | Negative | 4305998 - 4306177 | 6869.29 |
| hypothetical protein | CALAB_RS21405 | Not Available | Negative | 4306190 - 4306342 | 5869.37 |
| fatty acid desaturase | CALAB_RS16920 | Not Available | Positive | 4306568 - 4307569 | 38505.3 |
| heavy metal translocating p-type atpase | CALAB_RS16925 | Not Available | Negative | 4307674 - 4309833 | 78288.1 |
| shoct domain-containing protein | CALAB_RS16930 | Not Available | Negative | 4309867 - 4310073 | 8010.75 |
| isl3 family transposase | CALAB_RS16935 | Not Available | Positive | 4310753 - 4311985 | 48279.6 |
| heme lyase ccmf/nrfe family subunit | CALAB_RS16940 | Not Available | Negative | 4312126 - 4314348 | 82730.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
