Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS16800 | Not Available | Negative | 4275286 - 4276809 | 58073.5 |
| hypothetical protein | CALAB_RS16805 | Not Available | Negative | 4277006 - 4277290 | 11107.2 |
| sigma-54 interaction domain-containing protein | CALAB_RS16810 | Not Available | Positive | 4277866 - 4279392 | 57806.9 |
| dna mismatch repair endonuclease mutl | CALAB_RS16815 | Not Available | Positive | 4279641 - 4281467 | 68387.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | CALAB_RS16820 | Not Available | Positive | 4281470 - 4282387 | 35326.6 |
| fg-gap repeat domain-containing protein | CALAB_RS16825 | Not Available | Positive | 4282925 - 4284727 | 65262.1 |
| tonb-dependent receptor | CALAB_RS16830 | Not Available | Positive | 4285008 - 4287857 | 107823.0 |
| hypothetical protein | CALAB_RS16835 | Not Available | Positive | 4287872 - 4290664 | 104027.0 |
| porv/porq family protein | CALAB_RS16840 | Not Available | Positive | 4290677 - 4291699 | 37637.5 |
| m20 metallopeptidase family protein | CALAB_RS16845 | Not Available | Positive | 4291776 - 4292936 | 42960.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
