Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic nucleotide-binding domain-containing protein | CALAB_RS16695 | Not Available | Negative | 4253492 - 4254598 | 41281.1 |
| opt family oligopeptide transporter | CALAB_RS16705 | Not Available | Negative | 4254898 - 4256919 | 71951.2 |
| sulfite exporter taue/safe family protein | CALAB_RS16710 | Not Available | Negative | 4257051 - 4257836 | 28526.3 |
| sensor histidine kinase | CALAB_RS20385 | Not Available | Negative | 4257859 - 4259937 | 80702.3 |
| crp/fnr family transcriptional regulator | CALAB_RS16720 | Not Available | Negative | 4259941 - 4260618 | 25445.8 |
| spor domain-containing protein | CALAB_RS16725 | Not Available | Negative | 4260627 - 4261274 | 24924.2 |
| lapa family protein | CALAB_RS16730 | Not Available | Negative | 4261271 - 4261627 | 13647.8 |
| class ii sorl domain-containing protein | CALAB_RS16735 | Not Available | Negative | 4261972 - 4262364 | 14379.9 |
| linear amide c-n hydrolase | CALAB_RS16740 | Not Available | Negative | 4262786 - 4263868 | 40274.5 |
| type ii caax prenyl endopeptidase rce1 family protein | CALAB_RS16745 | Not Available | Negative | 4264030 - 4264770 | 27146.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
