Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching protein glgx | CALAB_RS01400 | Not Available | Positive | 370202 - 372322 | 81023.2 |
| gscfa domain-containing protein | CALAB_RS01405 | Not Available | Positive | 372325 - 373281 | 37790.3 |
| atp-binding protein | CALAB_RS01410 | Not Available | Positive | 374908 - 376194 | 50435.5 |
| rsme family rna methyltransferase | CALAB_RS01415 | Not Available | Positive | 376836 - 377537 | 26220.8 |
| histidine triad nucleotide-binding protein | CALAB_RS01420 | Not Available | Positive | 377557 - 377907 | 13346.3 |
| had family hydrolase | CALAB_RS01425 | Not Available | Positive | 377987 - 378703 | 28558.1 |
| isl3 family transposase | CALAB_RS01430 | Not Available | Positive | 378720 - 379952 | 48191.4 |
| hypothetical protein | CALAB_RS20860 | Not Available | Negative | 379963 - 380598 | 22797.6 |
| rrf2 family transcriptional regulator | CALAB_RS21220 | Not Available | Positive | 380735 - 381175 | 16806.0 |
| cytochrome ubiquinol oxidase subunit i | CALAB_RS01445 | Not Available | Positive | 381196 - 382572 | 51574.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
