Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | CALAB_RS16490 | Not Available | Positive | 4208920 - 4209897 | 36696.3 |
| threonine synthase | CALAB_RS16495 | Not Available | Positive | 4209907 - 4211184 | 46957.8 |
| pyridoxal-phosphate dependent enzyme | CALAB_RS16500 | Not Available | Positive | 4211245 - 4212717 | 56387.0 |
| dihydroorotase | CALAB_RS16505 | Not Available | Positive | 4213072 - 4214529 | 54462.1 |
| amidohydrolase family protein | CALAB_RS16510 | Not Available | Positive | 4214557 - 4215897 | 50602.1 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | CALAB_RS16515 | Not Available | Positive | 4216083 - 4218488 | 87779.3 |
| fad binding domain-containing protein | CALAB_RS16520 | Not Available | Positive | 4218488 - 4219360 | 32394.3 |
| (2fe-2s)-binding protein | CALAB_RS16525 | Not Available | Positive | 4219386 - 4219868 | 17350.2 |
| putative selenate reductase subunit ygfk | CALAB_RS16530 | Not Available | Negative | 4220156 - 4223305 | 118245.0 |
| glycine cleavage system protein gcvh | CALAB_RS16540 | Not Available | Negative | 4223998 - 4224375 | 13588.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
