Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isl3 family transposase | CALAB_RS16445 | Not Available | Negative | 4193024 - 4194010 | 38243.4 |
| zinc-ribbon domain-containing protein | CALAB_RS21785 | Not Available | Negative | 4194058 - 4194255 | 8079.61 |
| hypothetical protein | CALAB_RS16450 | Not Available | Negative | 4194285 - 4194806 | 20677.9 |
| four helix bundle protein | CALAB_RS16455 | Not Available | Negative | 4197115 - 4197468 | 13369.3 |
| duf92 domain-containing protein | CALAB_RS16460 | Not Available | Negative | 4198856 - 4200349 | 54496.4 |
| leucine--trna ligase | CALAB_RS16465 | Not Available | Negative | 4200367 - 4203000 | 101761.0 |
| sodium:solute symporter | CALAB_RS16470 | Not Available | Negative | 4203161 - 4204762 | 58601.2 |
| family 16 glycosylhydrolase | CALAB_RS20375 | Not Available | Negative | 4204785 - 4206578 | 68227.7 |
| hypothetical protein | CALAB_RS21570 | Not Available | Negative | 4207029 - 4207256 | 8145.6 |
| ygey family selenium metabolism-linked hydrolase | CALAB_RS16485 | Not Available | Positive | 4207696 - 4208907 | 45252.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
