Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrb | CALAB_RS16390 | Not Available | Positive | 4178198 - 4180186 | 76067.5 |
| flgd immunoglobulin-like domain containing protein | CALAB_RS20965 | Not Available | Negative | 4180275 - 4181744 | 54331.8 |
| isl3 family transposase | CALAB_RS16400 | Not Available | Positive | 4181899 - 4183131 | 48279.6 |
| alpha-amylase domain-containing protein | CALAB_RS16405 | Not Available | Positive | 4183176 - 4185515 | 88243.0 |
| t9ss type a sorting domain-containing protein | CALAB_RS16410 | Not Available | Negative | 4185746 - 4186732 | 36326.0 |
| beta-glucosidase | CALAB_RS16415 | Not Available | Positive | 4187561 - 4190071 | 93583.8 |
| nucleoside-triphosphatase | CALAB_RS16420 | Not Available | Negative | 4190095 - 4190559 | 17774.6 |
| hypothetical protein | CALAB_RS16425 | Not Available | Negative | 4190556 - 4191626 | 40286.0 |
| thioredoxin-dependent peroxiredoxin | CALAB_RS21780 | Not Available | Negative | 4191822 - 4192541 | 26166.2 |
| hypothetical protein | CALAB_RS16440 | Not Available | Negative | 4192633 - 4192917 | 11387.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
