Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | CALAB_RS16340 | Not Available | Positive | 4163476 - 4165758 | 86399.5 |
| ribonuclease h-like domain-containing protein | CALAB_RS16345 | Not Available | Positive | 4165765 - 4166970 | 46504.3 |
| amp-dependent synthetase/ligase | CALAB_RS16350 | Not Available | Positive | 4167039 - 4168832 | 67601.8 |
| duf4416 family protein | CALAB_RS16355 | Not Available | Positive | 4168844 - 4169377 | 20751.9 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | CALAB_RS16360 | Not Available | Positive | 4169420 - 4170055 | 22751.9 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | CALAB_RS16365 | Not Available | Positive | 4170059 - 4171066 | 36675.5 |
| universal stress protein | CALAB_RS16370 | Not Available | Positive | 4171102 - 4171941 | 31296.9 |
| cation:proton antiporter | CALAB_RS16375 | Not Available | Positive | 4172245 - 4174077 | 68194.3 |
| hypothetical protein | CALAB_RS21395 | Not Available | Positive | 4175859 - 4176035 | 6262.56 |
| aspartate ammonia-lyase | CALAB_RS16385 | Not Available | Positive | 4176124 - 4177989 | 69296.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
