Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase iii | CALAB_RS16190 | Not Available | Negative | 4124082 - 4126268 | 81718.2 |
| sigma 54-interacting transcriptional regulator | CALAB_RS16195 | Not Available | Positive | 4126751 - 4128298 | 58726.8 |
| outer membrane beta-barrel protein | CALAB_RS16200 | Not Available | Positive | 4128835 - 4129446 | 23701.0 |
| zinc-dependent alcohol dehydrogenase family protein | CALAB_RS16205 | Not Available | Positive | 4129597 - 4130625 | 38319.4 |
| metallophosphoesterase family protein | CALAB_RS16210 | Not Available | Positive | 4130642 - 4131304 | 24664.8 |
| chase2 domain-containing protein | CALAB_RS16215 | Not Available | Positive | 4132011 - 4134161 | 82816.4 |
| abc transporter substrate-binding protein | CALAB_RS16220 | Not Available | Positive | 4134133 - 4135467 | 50629.1 |
| carbohydrate abc transporter permease | CALAB_RS16225 | Not Available | Positive | 4135504 - 4136376 | 32851.4 |
| response regulator | CALAB_RS20365 | Not Available | Positive | 4137089 - 4138264 | 44923.5 |
| pocr ligand-binding domain-containing protein | CALAB_RS16235 | Not Available | Positive | 4138667 - 4139416 | 28486.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
