Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tubulin-like doman-containing protein | CALAB_RS16150 | Not Available | Positive | 4102338 - 4105754 | 135098.0 |
| hypothetical protein | CALAB_RS16155 | Not Available | Positive | 4105764 - 4107455 | 65133.1 |
| hypothetical protein | CALAB_RS16160 | Not Available | Positive | 4107452 - 4111207 | 147531.0 |
| vwa domain-containing protein | CALAB_RS16165 | Not Available | Positive | 4111209 - 4113278 | 79426.7 |
| tonb-dependent receptor | CALAB_RS16170 | Not Available | Negative | 4113437 - 4116313 | 108251.0 |
| t9ss type a sorting domain-containing protein | CALAB_RS21150 | Not Available | Negative | 4118133 - 4118876 | 27834.4 |
| hypothetical protein | CALAB_RS21155 | Not Available | Negative | 4118873 - 4119808 | 33548.2 |
| hypothetical protein | CALAB_RS21775 | Not Available | Negative | 4119911 - 4120042 | 4947.07 |
| aldehyde dehydrogenase family protein | CALAB_RS16180 | Not Available | Positive | 4120718 - 4122259 | 56241.6 |
| hypothetical protein | CALAB_RS16185 | Not Available | Negative | 4122498 - 4123142 | 23513.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
