Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr system precrrna processing endoribonuclease ramp protein cas6 | CALAB_RS16095 | Not Available | Positive | 4087083 - 4087979 | 34883.7 |
| cas10/cmr2 second palm domain-containing protein | CALAB_RS16100 | Not Available | Positive | 4088292 - 4089785 | 55985.5 |
| ramp superfamily crispr-associated protein | CALAB_RS16105 | Not Available | Positive | 4089786 - 4090340 | 20523.5 |
| hypothetical protein | CALAB_RS16110 | Not Available | Positive | 4090361 - 4091887 | 58094.8 |
| ramp superfamily crispr-associated protein | CALAB_RS16115 | Not Available | Positive | 4091887 - 4093227 | 49871.3 |
| tigr04423 family type iii crispr-associated protein | CALAB_RS16120 | Not Available | Positive | 4093228 - 4093644 | 16108.3 |
| tigr03986 family crispr-associated ramp protein | CALAB_RS16125 | Not Available | Positive | 4093660 - 4095801 | 82475.4 |
| tm1812 family crispr-associated protein | CALAB_RS16130 | Not Available | Positive | 4095877 - 4097523 | 64240.6 |
| radical sam protein | CALAB_RS16135 | Not Available | Positive | 4097787 - 4099289 | 58007.3 |
| isl3 family transposase | CALAB_RS16140 | Not Available | Positive | 4100848 - 4102080 | 48134.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
