Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thermonuclease family protein | CALAB_RS01355 | Not Available | Positive | 356978 - 358126 | 43622.0 |
| hypothetical protein | CALAB_RS21210 | Not Available | Negative | 358777 - 358929 | 5876.27 |
| s9 family peptidase | CALAB_RS01360 | Not Available | Positive | 358969 - 361122 | 82972.2 |
| hypothetical protein | CALAB_RS01365 | Not Available | Positive | 361266 - 362483 | 45558.8 |
| t9ss type a sorting domain-containing protein | CALAB_RS01370 | Not Available | Positive | 362483 - 364801 | 86092.7 |
| aminoacyl-histidine dipeptidase | CALAB_RS01375 | Not Available | Negative | 365390 - 366844 | 53868.6 |
| transposase | CALAB_RS21915 | Not Available | Negative | 367455 - 367817 | 14456.2 |
| zinc-ribbon domain-containing protein | CALAB_RS21215 | Not Available | Negative | 367842 - 368864 | 39495.5 |
| hypothetical protein | CALAB_RS21595 | Not Available | Negative | 368861 - 369070 | 8106.68 |
| is1380 family transposase | CALAB_RS19620 | Not Available | Negative | 369080 - 370057 | 37931.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
