Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamin tail domain-containing protein | CALAB_RS20340 | Not Available | Negative | 4030799 - 4032406 | 60617.9 |
| mfs transporter | CALAB_RS15850 | Not Available | Negative | 4032619 - 4034502 | 70161.1 |
| spoiid/lytb domain-containing protein | CALAB_RS15855 | Not Available | Negative | 4034505 - 4035854 | 50522.4 |
| hypothetical protein | CALAB_RS15860 | Not Available | Negative | 4035865 - 4037055 | 43900.9 |
| glycosyltransferase family 2 protein | CALAB_RS15865 | Not Available | Negative | 4037073 - 4038635 | 59546.6 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | CALAB_RS15870 | Not Available | Negative | 4038651 - 4039922 | 48075.6 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | CALAB_RS15875 | Not Available | Positive | 4040431 - 4041168 | 27240.0 |
| imidazole glycerol phosphate synthase subunit hisf | CALAB_RS15880 | Not Available | Positive | 4041162 - 4041917 | 26908.6 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | CALAB_RS15885 | Not Available | Positive | 4041914 - 4042507 | 22023.5 |
| Trna-ala | Not Available | Not Available | Positive | 4042830 - 4042902 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
