Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS15795 | Not Available | Positive | 4011030 - 4011251 | 8241.41 |
| glycoside hydrolase family 5 protein | CALAB_RS15800 | Not Available | Positive | 4011248 - 4012288 | 39720.0 |
| pas domain s-box protein | CALAB_RS15805 | Not Available | Positive | 4013445 - 4016195 | 104753.0 |
| fad-dependent oxidoreductase | CALAB_RS15810 | Not Available | Positive | 4016286 - 4018139 | 69040.8 |
| gdsl-type esterase/lipase family protein | CALAB_RS15815 | Not Available | Positive | 4018186 - 4018869 | 25809.3 |
| transglutaminase-like domain-containing protein | CALAB_RS15820 | Not Available | Positive | 4018937 - 4020499 | 60306.0 |
| atp-binding protein | CALAB_RS15825 | Not Available | Negative | 4021058 - 4022896 | 72261.4 |
| eco57i restriction-modification methylase domain-containing protein | CALAB_RS15830 | Not Available | Negative | 4022896 - 4026285 | 130722.0 |
| helicase-related protein | CALAB_RS15835 | Not Available | Negative | 4026282 - 4029506 | 125412.0 |
| sulfurtransferase-like selenium metabolism protein yedf | CALAB_RS15840 | Not Available | Negative | 4029950 - 4030285 | 12280.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
