Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 18 protein | CALAB_RS15745 | Not Available | Positive | 3991441 - 3992805 | 51192.1 |
| laci family dna-binding transcriptional regulator | CALAB_RS15750 | Not Available | Positive | 3992802 - 3993818 | 38486.9 |
| t9ss type a sorting domain-containing protein | CALAB_RS20330 | Not Available | Positive | 3993886 - 3994905 | 39087.4 |
| t9ss type a sorting domain-containing protein | CALAB_RS20335 | Not Available | Positive | 3994979 - 3997534 | 94865.3 |
| tonb-dependent receptor | CALAB_RS15765 | Not Available | Positive | 3997899 - 4000673 | 105721.0 |
| hypothetical protein | CALAB_RS15770 | Not Available | Positive | 4000687 - 4004205 | 133122.0 |
| porv/porq family protein | CALAB_RS15775 | Not Available | Positive | 4004247 - 4005302 | 38451.8 |
| hypothetical protein | CALAB_RS15780 | Not Available | Positive | 4005326 - 4006873 | 60453.4 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | CALAB_RS15785 | Not Available | Positive | 4006888 - 4009137 | 84037.2 |
| sodium:solute symporter family protein | CALAB_RS15790 | Not Available | Positive | 4009353 - 4011014 | 61688.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
