Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1634 family transposase | CALAB_RS15685 | Not Available | Negative | 3971556 - 3973352 | 69957.7 |
| t9ss type a sorting domain-containing protein | CALAB_RS15690 | Not Available | Positive | 3973934 - 3976399 | 94099.2 |
| is1182 family transposase | CALAB_RS15695 | Not Available | Negative | 3976733 - 3978319 | 61352.2 |
| s41 family peptidase | CALAB_RS15700 | Not Available | Positive | 3978557 - 3981682 | 119858.0 |
| nfed family protein | CALAB_RS15705 | Not Available | Positive | 3982116 - 3982565 | 16399.6 |
| spfh domain-containing protein | CALAB_RS15710 | Not Available | Positive | 3982715 - 3983695 | 36898.2 |
| glycoside hydrolase family 2 | CALAB_RS15725 | Not Available | Positive | 3984519 - 3987110 | 98948.8 |
| sugar mfs transporter | CALAB_RS15730 | Not Available | Positive | 3987165 - 3988427 | 46239.0 |
| rok family protein | CALAB_RS15735 | Not Available | Positive | 3988509 - 3989423 | 33177.9 |
| glycoside hydrolase family 9 protein | CALAB_RS15740 | Not Available | Positive | 3989416 - 3991434 | 74796.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
