Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| initiation factor 2b related protein | CALAB_RS15635 | Not Available | Positive | 3959399 - 3960289 | 34249.6 |
| hypothetical protein | CALAB_RS15640 | Not Available | Positive | 3960292 - 3960498 | 7849.9 |
| type ii toxin-antitoxin system vapc family toxin | CALAB_RS15645 | Not Available | Positive | 3960495 - 3960932 | 17181.1 |
| hypothetical protein | CALAB_RS15650 | Not Available | Positive | 3960929 - 3961642 | 27300.4 |
| hypothetical protein | CALAB_RS15655 | Not Available | Positive | 3961642 - 3962466 | 31048.7 |
| alanine/glycine:cation symporter family protein | CALAB_RS15660 | Not Available | Positive | 3962495 - 3964051 | 56080.2 |
| Trna-lys | Not Available | Not Available | Positive | 3964099 - 3964171 | Not Available |
| hypothetical protein | CALAB_RS15670 | Not Available | Negative | 3964559 - 3964846 | 10750.7 |
| flgd immunoglobulin-like domain containing protein | CALAB_RS15675 | Not Available | Negative | 3965542 - 3968877 | 123933.0 |
| peptidylprolyl isomerase | CALAB_RS15680 | Not Available | Positive | 3969555 - 3971012 | 57224.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
