Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosine-specific kinase | CALAB_RS15585 | Not Available | Negative | 3949192 - 3949674 | 17833.9 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | CALAB_RS15590 | Not Available | Positive | 3949977 - 3951305 | 49303.6 |
| response regulator | CALAB_RS15595 | Not Available | Positive | 3951314 - 3952348 | 39409.8 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | CALAB_RS15600 | Not Available | Positive | 3952355 - 3953809 | 54085.8 |
| response regulator | CALAB_RS15605 | Not Available | Positive | 3953827 - 3954570 | 28246.1 |
| nad(p)/fad-dependent oxidoreductase | CALAB_RS15610 | Not Available | Positive | 3954722 - 3955732 | 38674.0 |
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | CALAB_RS15615 | Not Available | Positive | 3955822 - 3956709 | 31886.7 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | CALAB_RS15620 | Not Available | Positive | 3956710 - 3957282 | 21357.1 |
| aspartate aminotransferase family protein | CALAB_RS15625 | Not Available | Negative | 3957363 - 3958844 | 54827.8 |
| divalent-cation tolerance protein cuta | CALAB_RS15630 | Not Available | Positive | 3959088 - 3959402 | 11829.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
