Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | CALAB_RS15535 | Not Available | Negative | 3936261 - 3937250 | 36476.1 |
| hydrogenase iron-sulfur subunit | CALAB_RS15540 | Not Available | Negative | 3937284 - 3937727 | 16612.2 |
| fad-dependent oxidoreductase | CALAB_RS15545 | Not Available | Negative | 3937802 - 3941170 | 123429.0 |
| cob--com heterodisulfide reductase iron-sulfur subunit b family protein | CALAB_RS15550 | Not Available | Negative | 3941192 - 3942079 | 33206.4 |
| 4fe-4s dicluster domain-containing protein | CALAB_RS15555 | Not Available | Negative | 3942082 - 3942654 | 21721.3 |
| abgt family transporter | CALAB_RS15560 | Not Available | Positive | 3943145 - 3944695 | 55680.9 |
| adenosylhomocysteinase | CALAB_RS15565 | Not Available | Negative | 3944873 - 3946129 | 46416.7 |
| sigma-70 family rna polymerase sigma factor | CALAB_RS15570 | Not Available | Negative | 3946274 - 3947461 | 46666.2 |
| tetratricopeptide repeat protein | CALAB_RS15575 | Not Available | Negative | 3947602 - 3948525 | 35931.5 |
| heat repeat domain-containing protein | CALAB_RS15580 | Not Available | Negative | 3948522 - 3949157 | 24762.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
