Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | CALAB_RS15480 | Not Available | Positive | 3920427 - 3921638 | 44670.8 |
| tryptophan synthase subunit alpha | CALAB_RS15485 | Not Available | Positive | 3921695 - 3922483 | 29826.4 |
| alpha/beta hydrolase family protein | CALAB_RS15495 | Not Available | Positive | 3923627 - 3925702 | 79253.5 |
| duf3108 domain-containing protein | CALAB_RS15500 | Not Available | Positive | 3926258 - 3927043 | 30587.1 |
| hypothetical protein | CALAB_RS15505 | Not Available | Negative | 3927052 - 3927876 | 30723.0 |
| gnat family n-acetyltransferase | CALAB_RS15510 | Not Available | Positive | 3928143 - 3928916 | 30460.1 |
| 2-oxoglutarate dehydrogenase e1 component | CALAB_RS15515 | Not Available | Positive | 3929648 - 3932347 | 102854.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | CALAB_RS15520 | Not Available | Positive | 3932356 - 3933591 | 46070.7 |
| hydrogenase maturation protease | CALAB_RS15525 | Not Available | Negative | 3934217 - 3934744 | 19204.8 |
| ni/fe hydrogenase subunit alpha | CALAB_RS15530 | Not Available | Negative | 3934734 - 3936212 | 55191.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
