Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | CALAB_RS15430 | Not Available | Positive | 3911717 - 3912268 | 21241.8 |
| ai-2e family transporter | CALAB_RS15435 | Not Available | Positive | 3912265 - 3913347 | 41148.1 |
| nudix domain-containing protein | CALAB_RS15440 | Not Available | Negative | 3913355 - 3913912 | 21120.2 |
| transposase | CALAB_RS15445 | Not Available | Positive | 3914241 - 3914570 | 12878.6 |
| transposase | CALAB_RS15450 | Not Available | Positive | 3914804 - 3915412 | 23285.5 |
| anthranilate synthase component i | CALAB_RS15455 | Not Available | Positive | 3915732 - 3917216 | 55267.6 |
| anthranilate synthase component ii | CALAB_RS15460 | Not Available | Positive | 3917216 - 3917803 | 21962.6 |
| anthranilate phosphoribosyltransferase | CALAB_RS15465 | Not Available | Positive | 3917800 - 3918810 | 36237.4 |
| indole-3-glycerol phosphate synthase trpc | CALAB_RS15470 | Not Available | Positive | 3918829 - 3919641 | 30341.2 |
| phosphoribosylanthranilate isomerase | CALAB_RS15475 | Not Available | Positive | 3919625 - 3920278 | 24414.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
