Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4388 domain-containing protein | CALAB_RS20325 | Not Available | Positive | 3900924 - 3902021 | 41639.2 |
| methylmalonyl-coa mutase | CALAB_RS15385 | Not Available | Positive | 3902265 - 3903908 | 62001.1 |
| cobalamin b12-binding domain-containing protein | CALAB_RS15390 | Not Available | Positive | 3903933 - 3904364 | 15849.2 |
| gxxexxy protein | CALAB_RS15395 | Not Available | Positive | 3904874 - 3905254 | 14862.1 |
| radc family protein | CALAB_RS15400 | Not Available | Positive | 3905734 - 3906453 | 27205.1 |
| acyl-coa carboxylase subunit beta | CALAB_RS15405 | Not Available | Positive | 3906463 - 3908013 | 57168.8 |
| phosphatase pap2 family protein | CALAB_RS15410 | Not Available | Positive | 3908118 - 3909023 | 35607.2 |
| gnat family n-acetyltransferase | CALAB_RS15415 | Not Available | Positive | 3909014 - 3909496 | 19012.9 |
| lyse family translocator | CALAB_RS15420 | Not Available | Positive | 3909522 - 3910343 | 30965.5 |
| nad-dependent succinate-semialdehyde dehydrogenase | CALAB_RS15425 | Not Available | Positive | 3910359 - 3911720 | 49894.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
