Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hype | CALAB_RS15325 | Not Available | Positive | 3886706 - 3887761 | 37760.9 |
| glycosyltransferase | CALAB_RS20315 | Not Available | Positive | 3888394 - 3889524 | 43875.6 |
| oligosaccharide flippase family protein | CALAB_RS15340 | Not Available | Negative | 3889516 - 3890910 | 53393.5 |
| gnat family n-acetyltransferase | CALAB_RS15345 | Not Available | Negative | 3890918 - 3891901 | 38556.2 |
| srpbcc domain-containing protein | CALAB_RS20320 | Not Available | Negative | 3891898 - 3892344 | 17610.5 |
| tonb-dependent receptor | CALAB_RS15355 | Not Available | Positive | 3892994 - 3895306 | 86896.9 |
| pp2c family protein-serine/threonine phosphatase | CALAB_RS15360 | Not Available | Positive | 3895755 - 3897425 | 63214.8 |
| stas domain-containing protein | CALAB_RS15365 | Not Available | Positive | 3897720 - 3898064 | 12848.8 |
| sugar phosphorylase | CALAB_RS15370 | Not Available | Positive | 3898071 - 3899954 | 73131.0 |
| phosphatidate cytidylyltransferase | CALAB_RS15375 | Not Available | Positive | 3900086 - 3900913 | 30477.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
