Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1634 family transposase | CALAB_RS15220 | Not Available | Negative | 3864290 - 3865951 | 64652.0 |
| duf1858 domain-containing protein | CALAB_RS15225 | Not Available | Negative | 3866100 - 3866309 | 7943.91 |
| atp-dependent chaperone clpb | CALAB_RS15230 | Not Available | Negative | 3866877 - 3869495 | 98988.4 |
| twin-arginine translocase tata/tate family subunit | CALAB_RS15235 | Not Available | Negative | 3869635 - 3869793 | 5786.12 |
| dna repair protein rada | CALAB_RS15240 | Not Available | Negative | 3870323 - 3871657 | 49342.0 |
| tigr00266 family protein | CALAB_RS15245 | Not Available | Positive | 3871792 - 3872550 | 26650.5 |
| preprotein translocase subunit secg | CALAB_RS15250 | Not Available | Positive | 3873411 - 3873773 | 12707.7 |
| Trna-leu | Not Available | Not Available | Positive | 3873787 - 3873871 | Not Available |
| phosphatase pap2 family protein | CALAB_RS15260 | Not Available | Positive | 3873927 - 3874496 | 21574.8 |
| cyclase family protein | CALAB_RS15265 | Not Available | Positive | 3874639 - 3875283 | 23588.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
