Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | CALAB_RS15170 | Not Available | Positive | 3849088 - 3849642 | 21903.3 |
| fecr family protein | CALAB_RS20310 | Not Available | Positive | 3849747 - 3850832 | 41024.5 |
| tonb-dependent receptor domain-containing protein | CALAB_RS15180 | Not Available | Positive | 3850899 - 3853811 | 110161.0 |
| tonb-dependent receptor | CALAB_RS15185 | Not Available | Positive | 3854168 - 3856648 | 89961.2 |
| sodium:solute symporter family protein | CALAB_RS15190 | Not Available | Positive | 3856869 - 3858755 | 69005.1 |
| beta-phosphoglucomutase family hydrolase | CALAB_RS15195 | Not Available | Positive | 3858800 - 3861949 | 119936.0 |
| uridine kinase | CALAB_RS15200 | Not Available | Positive | 3861964 - 3862602 | 24448.8 |
| hypothetical protein | CALAB_RS15205 | Not Available | Positive | 3863283 - 3863486 | 7669.53 |
| thioredoxin family protein | CALAB_RS15210 | Not Available | Negative | 3863577 - 3863975 | 14830.6 |
| hypothetical protein | CALAB_RS15215 | Not Available | Negative | 3863975 - 3864190 | 7969.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
