Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna methyltransferase | CALAB_RS15025 | Not Available | Negative | 3804641 - 3805933 | 49944.6 |
| trans-sulfuration enzyme family protein | CALAB_RS15030 | Not Available | Positive | 3806119 - 3807318 | 43753.8 |
| udp-glucuronic acid decarboxylase family protein | CALAB_RS15035 | Not Available | Positive | 3807484 - 3808443 | 36569.5 |
| class ii aldolase/adducin family protein | CALAB_RS15040 | Not Available | Positive | 3808779 - 3810062 | 47110.1 |
| class ii aldolase/adducin family protein | CALAB_RS15045 | Not Available | Positive | 3810093 - 3810878 | 29066.5 |
| duf5009 domain-containing protein | CALAB_RS15050 | Not Available | Negative | 3811659 - 3813074 | 54063.8 |
| hydantoinase/oxoprolinase family protein | CALAB_RS15055 | Not Available | Negative | 3813071 - 3815242 | 78626.9 |
| hypothetical protein | CALAB_RS15060 | Not Available | Negative | 3815256 - 3816719 | 52806.3 |
| rok family transcriptional regulator | CALAB_RS15065 | Not Available | Positive | 3816864 - 3818084 | 45351.8 |
| hypothetical protein | CALAB_RS15070 | Not Available | Positive | 3818909 - 3819448 | 20340.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
