Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1182 family transposase | CALAB_RS14975 | Not Available | Positive | 3790842 - 3792428 | 61352.2 |
| class i fructose-bisphosphate aldolase | CALAB_RS14980 | Not Available | Negative | 3793111 - 3794175 | 38757.5 |
| kama family radical sam protein | CALAB_RS14985 | Not Available | Positive | 3794586 - 3795884 | 50439.7 |
| 3-deoxy-7-phosphoheptulonate synthase | CALAB_RS21550 | Not Available | Positive | 3795991 - 3797679 | 62663.0 |
| sigma-54-dependent transcriptional regulator | CALAB_RS14995 | Not Available | Negative | 3797681 - 3799063 | 52228.3 |
| hypothetical protein | CALAB_RS15000 | Not Available | Negative | 3799080 - 3800261 | 46073.1 |
| cytochrome c3 family protein | CALAB_RS15005 | Not Available | Positive | 3800470 - 3801972 | 56976.4 |
| response regulator | CALAB_RS15010 | Not Available | Negative | 3802109 - 3802525 | 15433.1 |
| aldo/keto reductase | CALAB_RS15015 | Not Available | Negative | 3803071 - 3804027 | 35953.9 |
| mjai family restriction endonuclease | CALAB_RS15020 | Not Available | Negative | 3804046 - 3804636 | 22351.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
