Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | CALAB_RS14775 | Not Available | Positive | 3737465 - 3739636 | 83194.3 |
| alanine racemase | CALAB_RS14780 | Not Available | Positive | 3739727 - 3740854 | 41928.8 |
| carbon starvation protein a | CALAB_RS14785 | Not Available | Positive | 3740995 - 3742728 | 62178.9 |
| hypothetical protein | CALAB_RS14790 | Not Available | Positive | 3742718 - 3743014 | 11289.1 |
| arsa family atpase | CALAB_RS20275 | Not Available | Positive | 3743018 - 3743890 | 33078.5 |
| pas domain s-box protein | CALAB_RS20950 | Not Available | Positive | 3743976 - 3748301 | 164064.0 |
| ribonuclease hi | CALAB_RS14805 | Not Available | Negative | 3748871 - 3749320 | 17172.8 |
| duf2179 domain-containing protein | CALAB_RS14810 | Not Available | Negative | 3749333 - 3749887 | 20878.8 |
| s8 family serine peptidase | CALAB_RS14815 | Not Available | Positive | 3750252 - 3752606 | 85385.2 |
| fg-gap-like repeat-containing protein | CALAB_RS14820 | Not Available | Positive | 3752955 - 3754796 | 66863.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
