Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | CALAB_RS14725 | Not Available | Positive | 3720642 - 3721412 | 28072.4 |
| m20 family metallo-hydrolase | CALAB_RS14730 | Not Available | Positive | 3721417 - 3722490 | 39559.5 |
| argininosuccinate lyase | CALAB_RS14735 | Not Available | Positive | 3722617 - 3723963 | 50831.7 |
| glutamate synthase large subunit | CALAB_RS14740 | Not Available | Positive | 3724441 - 3728955 | 167272.0 |
| glutamate synthase subunit beta | CALAB_RS14745 | Not Available | Positive | 3728955 - 3730370 | 52737.3 |
| pyrroline-5-carboxylate reductase | CALAB_RS14750 | Not Available | Positive | 3730577 - 3731398 | 29573.9 |
| rna recognition motif domain-containing protein | CALAB_RS14755 | Not Available | Negative | 3731569 - 3731862 | 11255.0 |
| atp-binding protein | CALAB_RS14760 | Not Available | Negative | 3732421 - 3733554 | 43675.0 |
| sigma-54-dependent transcriptional regulator | CALAB_RS14765 | Not Available | Negative | 3734225 - 3735565 | 50698.4 |
| two-component system sensor histidine kinase ntrb | CALAB_RS14770 | Not Available | Negative | 3735581 - 3737221 | 62173.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
